STRINGSTRING
BACCAP_00658 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00658" - Aspartate racemase in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00658Aspartate racemase (235 aa)    
Predicted Functional Partners:
BACCAP_00657
Uncharacterized protein (403 aa)
 
          0.968
BACCAP_00659
UDP-N-acetylmuramyl-tripeptide synthetase (507 aa)
 
     
  0.834
purA
IMP--aspartate ligase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (424 aa)
         
  0.767
BACCAP_00163
L-asparaginase, type I (335 aa)
       
    0.764
pyrB
Aspartate transcarbamylase (354 aa)
       
    0.763
BACCAP_04196
Aspartokinase (408 aa)
       
  0.761
BACCAP_03608
Aminotransferase, class I/II (397 aa)
       
  0.761
BACCAP_01993
Aminotransferase, class I/II (380 aa)
       
  0.761
argG
Citrulline--aspartate ligase (430 aa)
         
  0.761
BACCAP_00656
Uncharacterized protein (67 aa)
              0.679
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (2%) [HD]