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BACCAP_00666 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00666" - DNA gyrase/topoisomerase IV, A subunit in Pseudoflavonifractor capillosus
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00666DNA gyrase/topoisomerase IV, A subunit (747 aa)    
Predicted Functional Partners:
BACCAP_00667
DNA topoisomerase (ATP-hydrolyzing) (660 aa)
  0.999
gyrB
DNA gyrase subunit B ; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (649 aa)
  0.996
dnaN
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (370 aa)
   
  0.899
BACCAP_02783
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (784 aa)
 
   
  0.866
polA
DNA polymerase (889 aa)
   
 
  0.821
BACCAP_00940
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (513 aa)
     
   
  0.800
smc
Chromosome partition protein Smc ; Required for chromosome condensation and partitioning (1192 aa)
     
 
  0.795
BACCAP_02344
S1 RNA binding domain protein (313 aa)
 
 
  0.781
metG
Methionine--tRNA ligase (656 aa)
   
 
  0.743
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase ; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (649 aa)
 
 
  0.708
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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