STRINGSTRING
BACCAP_00673 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00673" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00673Uncharacterized protein (416 aa)    
Predicted Functional Partners:
BACCAP_03924
TQXA domain protein (1725 aa)
   
          0.743
BACCAP_00674
Putative penicillin-binding protein 2 (697 aa)
              0.741
BACCAP_01764
Cna protein B-type domain protein (2025 aa)
   
          0.726
BACCAP_03804
Uncharacterized protein (702 aa)
   
          0.707
BACCAP_01804
NlpC/P60 family protein (696 aa)
   
          0.666
BACCAP_03938
Uncharacterized protein (211 aa)
   
          0.611
BACCAP_00675
Putative rod shape-determining protein MreD (169 aa)
              0.611
mreC
Cell shape protein MreC ; Involved in formation and maintenance of cell shape (284 aa)
              0.591
BACCAP_03926
Uncharacterized protein (298 aa)
   
          0.589
BACCAP_00496
LPXTG-motif cell wall anchor domain protein (753 aa)
   
          0.564
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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