STRINGSTRING
BACCAP_00701 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00701" - TIGR00268 family protein in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00701TIGR00268 family protein (250 aa)    
Predicted Functional Partners:
BACCAP_00702
Uncharacterized protein (264 aa)
 
     
  0.975
BACCAP_00703
UPF0272 protein BACCAP_00703 (448 aa)
 
          0.972
BACCAP_00704
Tungsten formylmethanofuran dehydrogenase, subunit E, FwdE (175 aa)
 
          0.879
BACCAP_04293
Uncharacterized protein (429 aa)
 
     
  0.860
BACCAP_00705
Periplasmic binding protein (373 aa)
 
          0.734
BACCAP_00707
ABC transporter, ATP-binding protein (251 aa)
              0.698
BACCAP_00706
Iron chelate uptake ABC transporter, FeCT family, permease protein (358 aa)
              0.695
guaB
Inosine-5’-monophosphate dehydrogenase (491 aa)
       
    0.664
BACCAP_00699
4Fe-4S binding domain protein (416 aa)
 
          0.658
argF
Ornithine carbamoyltransferase ; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (307 aa)
       
    0.606
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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