STRINGSTRING
BACCAP_00704 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00704" - Tungsten formylmethanofuran dehydrogenase, subunit E, FwdE in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00704Tungsten formylmethanofuran dehydrogenase, subunit E, FwdE (175 aa)    
Predicted Functional Partners:
BACCAP_00705
Periplasmic binding protein (373 aa)
 
          0.953
BACCAP_00707
ABC transporter, ATP-binding protein (251 aa)
 
          0.948
BACCAP_00706
Iron chelate uptake ABC transporter, FeCT family, permease protein (358 aa)
 
          0.927
BACCAP_00702
Uncharacterized protein (264 aa)
 
          0.880
BACCAP_00701
TIGR00268 family protein (250 aa)
 
          0.879
BACCAP_00703
UPF0272 protein BACCAP_00703 (448 aa)
              0.859
BACCAP_02747
4Fe-4S binding domain protein (600 aa)
         
  0.824
BACCAP_04127
Methyltransferase, YaeB family (154 aa)
   
    0.741
BACCAP_02771
Periplasmic binding protein (382 aa)
 
          0.699
BACCAP_02325
4Fe-4S binding domain protein (236 aa)
   
   
  0.682
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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