STRINGSTRING
BACCAP_00725 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00725" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00725Uncharacterized protein (214 aa)    
Predicted Functional Partners:
BACCAP_04784
Methylcobalamin-coenzyme M methyltransferase domain protein (358 aa)
   
          0.703
BACCAP_01472
Uncharacterized protein (360 aa)
   
          0.692
BACCAP_04003
Methyltransferase, MtaA/CmuA family (452 aa)
 
          0.651
BACCAP_00876
Uncharacterized protein (221 aa)
 
          0.648
BACCAP_00726
Uncharacterized protein (294 aa)
              0.628
BACCAP_04782
Methyltransferase, MtaA/CmuA family (451 aa)
 
          0.624
BACCAP_00704
Tungsten formylmethanofuran dehydrogenase, subunit E, FwdE (175 aa)
   
          0.592
BACCAP_00730
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (173 aa)
              0.569
BACCAP_00729
Response regulator receiver domain protein (232 aa)
              0.569
BACCAP_00728
Acetyltransferase, GNAT family (184 aa)
              0.569
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (11%) [HD]