STRINGSTRING
BACCAP_00726 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00726" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00726Uncharacterized protein (294 aa)    
Predicted Functional Partners:
BACCAP_00730
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (173 aa)
              0.771
BACCAP_00729
Response regulator receiver domain protein (232 aa)
              0.771
BACCAP_00728
Acetyltransferase, GNAT family (184 aa)
              0.771
BACCAP_00727
23S rRNA (Uracil-5-)-methyltransferase RumA (454 aa)
              0.771
BACCAP_00725
Uncharacterized protein (214 aa)
              0.628
BACCAP_00733
Acetyltransferase, GNAT family (166 aa)
              0.546
BACCAP_00732
ABC transporter, ATP-binding protein (623 aa)
              0.546
BACCAP_00731
ABC transporter, ATP-binding protein (607 aa)
              0.546
BACCAP_02241
Ferrous iron transport protein B ; Fe(2+) uptake system, probably driven by GTP (716 aa)
   
          0.470
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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