STRINGSTRING
BACCAP_00740 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00740" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00740Uncharacterized protein (155 aa)    
Predicted Functional Partners:
BACCAP_00739
Uncharacterized protein (263 aa)
   
  0.997
BACCAP_00741
HAD hydrolase, TIGR02254 family (232 aa)
   
        0.865
BACCAP_00738
Uncharacterized protein (134 aa)
              0.607
BACCAP_00743
Uncharacterized protein (159 aa)
              0.545
BACCAP_00742
GDSL-like protein (319 aa)
              0.545
BACCAP_02506
Uncharacterized protein (485 aa)
     
        0.483
BACCAP_03256
DHHA1 domain protein (663 aa)
   
          0.473
BACCAP_00737
Peptidase, S41 family (439 aa)
              0.461
BACCAP_00746
Anti-sigma-V factor RsiV domain protein (287 aa)
              0.435
sigV
RNA polymerase sigma factor (185 aa)
              0.435
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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