STRINGSTRING
BACCAP_00742 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00742" - GDSL-like protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00742GDSL-like protein (319 aa)    
Predicted Functional Partners:
BACCAP_00743
Uncharacterized protein (159 aa)
              0.867
BACCAP_00746
Anti-sigma-V factor RsiV domain protein (287 aa)
              0.694
sigV
RNA polymerase sigma factor (185 aa)
              0.694
BACCAP_00740
Uncharacterized protein (155 aa)
              0.545
BACCAP_00741
HAD hydrolase, TIGR02254 family (232 aa)
              0.536
BACCAP_00739
Uncharacterized protein (263 aa)
              0.536
BACCAP_01859
DNA-binding helix-turn-helix protein (129 aa)
   
          0.444
BACCAP_03146
HipA-like C-terminal domain protein (305 aa)
   
          0.431
BACCAP_03144
Uncharacterized protein (408 aa)
   
          0.429
BACCAP_01036
Uncharacterized protein (385 aa)
   
          0.406
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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