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EDN01630.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN01630.1" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01630.1Uncharacterized protein; COG- NOG17179 non supervised orthologous group; Psort location- Cytoplasmic, score-8.96 (184 aa)    
Predicted Functional Partners:
EDN01629.1
EDD domain protein, DegV family; COG- COG1307 Uncharacterized protein conserved in bacteria (301 aa)
     
  0.853
nifJ
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1180 aa)
   
 
  0.849
EDN01332.1
KEGG- gka-GK1431 0. glutamate synthaselarge subunit K00265; COG- COG0069 Glutamate synthase domain 2; Psort location- Cytoplasmic, score-8.96 (1551 aa)
       
  0.845
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (491 aa)
       
  0.670
EDN01631.1
annotation not available (71 aa)
              0.629
EDM97779.1
EDD domain protein, DegV family; COG- COG1307 Uncharacterized protein conserved in bacteria (291 aa)
          0.618
EDN00120.1
DnaJ domain protein; COG- COG2214 DnaJ-class molecular chaperone; Psort location- Cytoplasmic, score-9.26 (210 aa)
 
 
  0.579
EDN00982.1
Diguanylate cyclase (GGDEF) domain protein; KEGG- shn-Shewana3_3829 1.4e-41 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745; COG- COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location- Cytoplasmic, score-8.96 (1428 aa)
       
  0.578
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11 (325 aa)
              0.530
EDM99950.1
Uncharacterized protein; COG- NOG17272 non supervised orthologous group; Psort location- Cytoplasmic, score-8.96 (201 aa)
     
    0.516
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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