STRINGSTRING
BACCAP_00762 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00762" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00762Uncharacterized protein (184 aa)    
Predicted Functional Partners:
BACCAP_00761
EDD domain protein, DegV family (301 aa)
              0.820
BACCAP_00763
Uncharacterized protein (71 aa)
              0.664
prmA
Ribosomal protein L11 methyltransferase ; Methylates ribosomal protein L11 (325 aa)
              0.523
BACCAP_00764
Uncharacterized protein (88 aa)
              0.520
BACCAP_03877
Uncharacterized protein (211 aa)
 
          0.467
BACCAP_02402
Efflux ABC transporter, permease protein (665 aa)
   
          0.442
BACCAP_01905
DNA helicase (717 aa)
 
          0.421
BACCAP_04858
Channel protein, hemolysin III family (248 aa)
              0.404
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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