STRINGSTRING
BACCAP_00776 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00776" - DNA-binding helix-turn-helix protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00776DNA-binding helix-turn-helix protein (360 aa)    
Predicted Functional Partners:
BACCAP_01431
DNA-binding helix-turn-helix protein (417 aa)
   
          0.773
BACCAP_02820
DNA-binding helix-turn-helix protein (307 aa)
   
          0.765
BACCAP_01078
DNA-binding helix-turn-helix protein (94 aa)
   
          0.736
BACCAP_00140
DNA-binding helix-turn-helix protein (253 aa)
 
          0.718
BACCAP_00777
Uncharacterized protein (188 aa)
              0.645
BACCAP_00587
DNA-binding helix-turn-helix protein (155 aa)
   
          0.634
BACCAP_03649
ABC transporter, ATP-binding protein (274 aa)
 
          0.515
BACCAP_00780
Uncharacterized protein (357 aa)
              0.436
BACCAP_00779
Transcriptional regulator, MarR family (147 aa)
              0.436
BACCAP_01701
ABC transporter, ATP-binding protein (341 aa)
              0.404
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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