STRINGSTRING
BACCAP_00780 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00780" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00780Uncharacterized protein (357 aa)    
Predicted Functional Partners:
BACCAP_00779
Transcriptional regulator, MarR family (147 aa)
              0.882
BACCAP_00738
Uncharacterized protein (134 aa)
   
          0.631
BACCAP_03924
TQXA domain protein (1725 aa)
 
          0.593
BACCAP_00777
Uncharacterized protein (188 aa)
              0.563
BACCAP_03804
Uncharacterized protein (702 aa)
   
          0.547
BACCAP_01172
Uncharacterized protein (585 aa)
   
          0.537
BACCAP_01764
Cna protein B-type domain protein (2025 aa)
 
          0.523
BACCAP_04377
Uncharacterized protein (160 aa)
   
          0.522
BACCAP_04102
Cobalt transport protein (278 aa)
   
          0.512
BACCAP_03926
Uncharacterized protein (298 aa)
   
          0.495
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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