STRINGSTRING
BACCAP_00788 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00788" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00788Uncharacterized protein (231 aa)    
Predicted Functional Partners:
BACCAP_00786
Transcriptional regulator, HxlR family (109 aa)
   
   
  0.749
BACCAP_00787
Uncharacterized protein (74 aa)
              0.671
BACCAP_01741
Transcriptional regulator, Rrf2 family (152 aa)
 
     
  0.596
BACCAP_00789
Pyridoxamine 5’-phosphate oxidase family protein (133 aa)
              0.560
BACCAP_02923
Divergent AAA domain protein (482 aa)
   
        0.503
BACCAP_01737
Transcriptional regulator, HxlR family (121 aa)
   
   
  0.492
BACCAP_01731
Transcriptional regulator, HxlR family (115 aa)
   
   
  0.492
BACCAP_00806
Transcriptional regulator, HxlR family (116 aa)
   
   
  0.492
BACCAP_02768
Transcriptional regulator, Rrf2 family (144 aa)
              0.404
BACCAP_01743
Uncharacterized protein (252 aa)
              0.404
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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