STRINGSTRING
BACCAP_00805 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00805" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00805Uncharacterized protein (229 aa)    
Predicted Functional Partners:
BACCAP_00802
Uncharacterized protein (150 aa)
 
          0.780
BACCAP_00803
Oxidoreductase, aldo/keto reductase family protein (191 aa)
 
          0.702
BACCAP_00804
Uncharacterized protein (284 aa)
 
          0.658
BACCAP_00800
Uncharacterized protein (180 aa)
 
          0.583
BACCAP_00801
Uncharacterized protein (187 aa)
 
          0.576
BACCAP_00806
Transcriptional regulator, HxlR family (116 aa)
              0.520
BACCAP_02851
Uncharacterized protein (358 aa)
   
          0.500
BACCAP_02845
No annotation available (358 aa)
   
          0.500
BACCAP_00807
4Fe-4S binding domain protein (386 aa)
 
          0.475
BACCAP_03418
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (339 aa)
   
          0.467
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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