STRINGSTRING
BACCAP_00815 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00815" - EDD domain protein, DegV family in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00815EDD domain protein, DegV family (151 aa)    
Predicted Functional Partners:
BACCAP_00814
EDD domain protein, DegV family (124 aa)
          0.953
BACCAP_01378
Uncharacterized protein (558 aa)
 
        0.775
BACCAP_04254
EDD domain protein, DegV family (291 aa)
   
          0.652
BACCAP_02092
EDD domain protein, DegV family (278 aa)
   
          0.651
BACCAP_00816
Uncharacterized protein (354 aa)
              0.588
BACCAP_04052
EDD domain protein, DegV family (281 aa)
   
          0.586
pgk
Phosphoglycerate kinase (423 aa)
       
    0.502
tpiA
Triose-phosphate isomerase ; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (257 aa)
       
    0.502
fba
Fructose-1,6-bisphosphate aldolase, class II (325 aa)
       
    0.492
BACCAP_00853
DNA internalization competence protein ComEC/Rec2-like protein (768 aa)
   
        0.465
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (4%) [HD]