STRINGSTRING
BACCAP_00820 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00820" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00820Uncharacterized protein (4122 aa)    
Predicted Functional Partners:
BACCAP_04667
Uncharacterized protein (324 aa)
 
          0.779
BACCAP_00311
Uncharacterized protein (852 aa)
   
          0.778
BACCAP_01622
Copper amine oxidase domain protein (546 aa)
 
          0.777
BACCAP_00847
Uncharacterized protein (625 aa)
   
          0.772
BACCAP_03874
Uncharacterized protein (439 aa)
   
          0.764
BACCAP_00821
Uncharacterized protein (99 aa)
              0.709
BACCAP_01674
Uncharacterized protein (619 aa)
   
          0.676
BACCAP_00549
Uncharacterized protein (399 aa)
   
          0.652
BACCAP_04181
Uncharacterized protein (181 aa)
   
          0.611
BACCAP_00822
Transcriptional regulator, LuxR family (817 aa)
              0.577
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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