STRINGSTRING
BACCAP_00822 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00822" - Transcriptional regulator, LuxR family in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00822Transcriptional regulator, LuxR family (817 aa)    
Predicted Functional Partners:
BACCAP_00821
Uncharacterized protein (99 aa)
              0.692
BACCAP_01509
Aminotransferase, class I/II (390 aa)
       
 
  0.644
BACCAP_01379
Hemolysin (403 aa)
       
 
  0.644
BACCAP_02685
Hydrolase, alpha/beta domain protein (321 aa)
       
 
  0.626
BACCAP_00583
Uncharacterized protein (280 aa)
       
 
  0.626
BACCAP_00820
Uncharacterized protein (4122 aa)
              0.577
BACCAP_00824
Uncharacterized protein (44 aa)
              0.575
hcaR
Hca operon transcriptional activator (294 aa)
              0.575
BACCAP_00062
ABC transporter, ATP-binding protein (373 aa)
   
 
  0.573
BACCAP_00030
ABC transporter, ATP-binding protein (371 aa)
   
 
  0.573
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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