STRINGSTRING
BACCAP_00832 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00832" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00832Uncharacterized protein (174 aa)    
Predicted Functional Partners:
BACCAP_00831
Response regulator receiver domain protein (228 aa)
              0.859
BACCAP_00830
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (365 aa)
              0.859
BACCAP_00829
Uncharacterized protein (298 aa)
              0.859
BACCAP_00828
Uncharacterized protein (127 aa)
              0.859
BACCAP_00836
Uncharacterized protein (41 aa)
              0.570
BACCAP_00834
Uncharacterized protein (123 aa)
              0.570
BACCAP_00835
Uncharacterized protein (35 aa)
              0.454
BACCAP_00837
Inositol monophosphatase family protein (260 aa)
              0.441
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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