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STRINGSTRING
EDN01268.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN01268.1" - annotation not available in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01268.1annotation not available (41 aa)    
Predicted Functional Partners:
EDN01266.1
Uncharacterized protein; Psort location- CytoplasmicMembrane, score-9.46 (123 aa)
              0.845
EDN01267.1
annotation not available (35 aa)
              0.629
EDN01269.1
Inositol-1-monophosphatase; KEGG- gsu-GSU0942 4.2e-46 suhB; inositol-1-monophosphatase K01092; COG- COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (260 aa)
              0.612
EDN01264.1
annotation not available (174 aa)
              0.552
EDN01263.1
KEGG- rha-RHA1_ro05622 7.6e-31 response regulator (protein-glutamate methylesterase) K07669; COG- COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location- Cytoplasmic, score-9.97 (228 aa)
              0.552
EDN01262.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG- bcz-BCZK1773 1.7e-49 sensor histidine kinase; COG- COG0642 Signal transduction histidine kinase; Psort location- CytoplasmicMembrane, score-9.82 (365 aa)
              0.552
EDN01261.1
Uncharacterized protein; Psort location- CytoplasmicMembrane, score-9.50 (298 aa)
              0.552
EDN01260.1
Uncharacterized protein; Psort location- Cytoplasmic, score-8.96 (127 aa)
              0.552
EDN01270.1
KEGG- rru-Rru_A1450 1.6e-11 transcriptional regulator, ArsR family; COG- COG0640 Predicted transcriptional regulators; Psort location- Cytoplasmic, score-8.96 (103 aa)
              0.438
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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