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BACCAP_00857 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00857" - Glycosyl hydrolase family 3 N-terminal domain protein in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00857Glycosyl hydrolase family 3 N-terminal domain protein (1382 aa)    
Predicted Functional Partners:
BACCAP_00859
Glycosyl hydrolase family 3 N-terminal domain protein (816 aa)
 
   
 
0.908
BACCAP_00860
Uncharacterized protein (192 aa)
 
          0.832
sleB
Spore cortex-lytic enzyme (224 aa)
         
  0.832
BACCAP_04277
Putative sensor histidine kinase VirS (444 aa)
 
          0.786
BACCAP_04664
Putative sensor histidine kinase VirS (437 aa)
 
          0.785
BACCAP_04279
Uncharacterized protein (198 aa)
 
          0.782
BACCAP_02761
Beta-lactamase (727 aa)
       
  0.777
BACCAP_01446
Beta-lactamase (1653 aa)
       
  0.777
BACCAP_03599
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (431 aa)
 
          0.774
BACCAP_03495
Uncharacterized protein (456 aa)
 
          0.769
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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