STRINGSTRING
BACCAP_00859 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00859" - Glycosyl hydrolase family 3 N-terminal domain protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00859Glycosyl hydrolase family 3 N-terminal domain protein (816 aa)    
Predicted Functional Partners:
BACCAP_00860
Uncharacterized protein (192 aa)
          0.948
BACCAP_00857
Glycosyl hydrolase family 3 N-terminal domain protein (1382 aa)
 
   
 
0.908
sleB
Spore cortex-lytic enzyme (224 aa)
         
  0.832
BACCAP_03600
Glycosyl hydrolase family 3 N-terminal domain protein (921 aa)
 
   
 
0.830
BACCAP_03713
Glycosyl hydrolase family 2, sugar binding domain protein (786 aa)
 
   
  0.792
BACCAP_02761
Beta-lactamase (727 aa)
       
  0.777
BACCAP_01446
Beta-lactamase (1653 aa)
       
  0.777
BACCAP_00861
Transcriptional regulator, LacI family (341 aa)
              0.775
BACCAP_04279
Uncharacterized protein (198 aa)
 
          0.761
BACCAP_04721
Glycosyl hydrolase family 2, TIM barrel domain protein (404 aa)
 
   
  0.736
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (5%) [HD]