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EDN01296.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN01296.1" - Peptidase, U32 family in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01296.1Peptidase, U32 family; KEGG- tte-TTE1257 1.9e-105 Collagenase and related proteases K08303; COG- COG0826 Collagenase and related proteases; Psort location- Cytoplasmic, score-8.96 (405 aa)    
Predicted Functional Partners:
mltG
Endolytic murein transglycosylase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation (427 aa)
              0.888
EDN01295.1
Uncharacterized protein; KEGG- bcz-BCZK3615 9.7e-05 dhaK; possible dihydroxyacetone-related kinase K00863; COG- COG1461 Predicted kinase related to dihydroxyacetone kinase; Psort location- Cytoplasmic, score-8.96 (83 aa)
              0.831
EDN01294.1
Acyltransferase; KEGG- rso-RS03732 3.8e-05 RSp0635; putative acyltransferase transmembrane protein K00680; COG- COG3274 Uncharacterized protein conserved in bacteria; Psort location- CytoplasmicMembrane, score-10.00 (387 aa)
              0.831
asd
KEGG- ade-Adeh_0382 2.1e-129 aspartate-semialdehyde dehydrogenase K00133; COG- COG0136 Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family (368 aa)
     
    0.677
EDN01299.1
annotation not available (91 aa)
              0.605
EDN01298.1
annotation not available (55 aa)
              0.605
treP
KEGG- smu-SMU.2038 1.2e-185 pttB; putative PTS system, trehalose-specific IIABC component K02817-K02818-K02819; COG- COG2190 Phosphotransferase system IIA components; Psort location- CytoplasmicMembrane, score-10.00 (643 aa)
         
  0.491
EDN02040.1
PTS system, glucose-like IIB component; KEGG- gka-GK0991 1.8e-157 PTS system, glucose-specific enzyme II, A component K02763-K02764-K02765; COG- COG2190 Phosphotransferase system IIA components; Psort location- CytoplasmicMembrane, score-10.00 (711 aa)
         
  0.491
EDN01589.1
KEGG- blo-BL1108 0. purL; phosphoribosylformylglycinamidine synthase K01952; COG- COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain (1235 aa)
 
        0.488
EDM97498.1
RNA-binding protein, YhbY family; COG- COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein (109 aa)
 
 
      0.472
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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