STRINGSTRING
BACCAP_00865 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00865" - YceG family protein in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00865YceG family protein (427 aa)    
Predicted Functional Partners:
BACCAP_00864
Peptidase, U32 family (405 aa)
         
  0.912
BACCAP_00940
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (513 aa)
       
  0.834
BACCAP_00863
Uncharacterized protein (83 aa)
              0.829
BACCAP_00862
Acyltransferase (387 aa)
              0.829
BACCAP_03626
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase (799 aa)
       
    0.827
ilvE
Branched-chain-amino-acid transaminase (354 aa)
   
  0.792
BACCAP_04204
Penicillin-binding protein, 1A family (922 aa)
 
      0.726
BACCAP_03965
Uncharacterized protein (243 aa)
   
   
    0.690
thyA
Thymidylate synthase ; Provides the sole de novo source of dTMP for DNA biosynthesis (276 aa)
       
    0.654
BACCAP_03561
GMP synthase (115 aa)
       
    0.644
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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