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STRINGSTRING
EDN01309.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN01309.1" - Peptidase, S41 family in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01309.1Peptidase, S41 family; KEGG- dsy-DSY3259 2.0e-55 hypothetical protein K03797; COG- COG0793 Periplasmic protease; Belongs to the peptidase S41A family (637 aa)    
Predicted Functional Partners:
EDN01308.1
Uncharacterized protein; COG- NOG21938 non supervised orthologous group; Psort location- Cytoplasmic, score-8.96 (221 aa)
              0.622
EDN01310.1
annotation not available (365 aa)
              0.579
EDM98051.1
KEGG- mta-Moth_1307 1.8e-77 homoserine dehydrogenase K00003; COG- COG0460 Homoserine dehydrogenase; Psort location- Cytoplasmic, score-8.96 (406 aa)
       
    0.500
EDM98050.1
Aspartokinase; KEGG- chy-CHY_1909 5.5e-108 aspartate kinase, monofunctional class K00928; COG- COG0527 Aspartokinases; Psort location- Cytoplasmic, score-8.96; Belongs to the aspartokinase family (408 aa)
     
 
    0.481
EDN01314.1
UPF0145 protein BACCAP_00882; COG- COG0393 Uncharacterized conserved protein; Belongs to the UPF0145 family (104 aa)
              0.441
EDN01315.1
Transcriptional regulator, MerR family; KEGG- eci-UTI89_C3737 7.9e-07 yhdM; Zn(II)-responsive regulator of ZntA; COG- COG0789 Predicted transcriptional regulators (218 aa)
              0.427
EDN01313.1
Uncharacterized protein; Psort location- CytoplasmicMembrane, score-9.46 (96 aa)
              0.427
EDN01312.1
ABC transporter, ATP-binding protein; KEGG- ava-Ava_4151 4.1e-39 ABC transporter-like K01990; COG- COG1131 ABC-type multidrug transport system, ATPase component; Psort location- CytoplasmicMembrane, score-7.88 (246 aa)
              0.427
EDN01311.1
Uncharacterized protein; KEGG- lla-L109201 0.0049 cydB; cytochrome d ubiquinol oxidase subunit II K00426; COG- NOG09742 non supervised orthologous group; Psort location- CytoplasmicMembrane, score-10.00 (532 aa)
              0.427
EDM97716.1
Response regulator receiver domain protein; KEGG- fal-FRAAL1304 1.9e-11 putative protein-glutamate methylesterase; COG- COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain (199 aa)
       
    0.424
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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