STRINGSTRING
BACCAP_00877 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00877" - Peptidase, S41 family in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00877Peptidase, S41 family (637 aa)    
Predicted Functional Partners:
BACCAP_02243
Peptidase, M23 family (491 aa)
 
 
  0.703
BACCAP_02131
Peptidase, M23 family (350 aa)
 
 
  0.686
BACCAP_03464
Peptidase, M23 family (426 aa)
 
 
  0.675
BACCAP_00453
Peptidase, M23 family (508 aa)
 
 
  0.672
BACCAP_03221
Peptidase, M23 family (282 aa)
 
 
  0.672
BACCAP_00876
Uncharacterized protein (221 aa)
              0.634
htrA
HtrA protein (447 aa)
 
   
  0.623
BACCAP_00878
Uncharacterized protein (365 aa)
              0.595
prmA
Ribosomal protein L11 methyltransferase ; Methylates ribosomal protein L11 (325 aa)
 
        0.572
BACCAP_00629
Trypsin (425 aa)
   
   
  0.568
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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