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BACCAP_00880 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00880" - ABC transporter, ATP-binding protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00880ABC transporter, ATP-binding protein (246 aa)    
Predicted Functional Partners:
BACCAP_00879
Uncharacterized protein (532 aa)
 
          0.979
BACCAP_00882
UPF0145 protein BACCAP_00882 (104 aa)
              0.863
BACCAP_00883
Transcriptional regulator, MerR family (218 aa)
              0.859
BACCAP_00881
Uncharacterized protein (96 aa)
              0.859
BACCAP_01700
Uncharacterized protein (234 aa)
   
 
  0.817
BACCAP_01170
Uncharacterized protein (287 aa)
   
 
  0.817
BACCAP_03404
ABC transporter, ATP-binding protein (572 aa)
 
  0.727
BACCAP_02565
ABC transporter, ATP-binding protein (576 aa)
   
  0.727
BACCAP_02547
Putative phage tail component domain protein (578 aa)
 
  0.727
BACCAP_02168
ABC transporter, ATP-binding protein (569 aa)
 
  0.727
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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