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EDN01321.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN01321.1" - Site-specific recombinase, phage integrase family in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01321.1Site-specific recombinase, phage integrase family; COG- COG0582 Integrase; Psort location- Cytoplasmic, score-8.96; Belongs to the ’phage’ integrase family (377 aa)    
Predicted Functional Partners:
EDN01323.1
O-antigen polymerase; KEGG- sec-SC3636 2.9e-05 waaL; hypothetical protein K02847; COG- COG3307 Lipid A core - O-antigen ligase and related enzymes; Psort location- CytoplasmicMembrane, score-10.00 (526 aa)
   
        0.600
EDN01322.1
annotation not available (35 aa)
              0.598
EDN01324.1
KEGG- bca-BCE_5549 1.0e-26 glycosyl transferase, group 1 family protein K00754; COG- COG0438 Glycosyltransferase; Psort location- Cytoplasmic, score-8.96 (382 aa)
 
          0.583
EDN01037.1
Site-specific recombinase, phage integrase family; COG- COG0582 Integrase (198 aa)
   
          0.487
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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