STRINGSTRING
BACCAP_00904 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00904" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00904Uncharacterized protein (569 aa)    
Predicted Functional Partners:
BACCAP_00906
Uncharacterized protein (737 aa)
              0.643
BACCAP_00905
Sigma-70 region 2 (159 aa)
              0.643
BACCAP_00908
Repeat protein (2691 aa)
 
          0.602
BACCAP_01484
Uncharacterized protein (737 aa)
   
          0.582
BACCAP_00907
Uncharacterized protein (49 aa)
              0.544
BACCAP_02787
Putative dolichyl-phosphate-mannose-protein mannosyltransferase (756 aa)
   
          0.486
BACCAP_00323
Uncharacterized protein (248 aa)
   
          0.466
BACCAP_01837
Uncharacterized protein (170 aa)
   
          0.411
BACCAP_02387
Uncharacterized protein (214 aa)
   
          0.400
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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