STRINGSTRING
BACCAP_00922 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00922" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00922Uncharacterized protein (822 aa)    
Predicted Functional Partners:
BACCAP_00921
ABC transporter, ATP-binding protein (254 aa)
 
          0.965
BACCAP_00923
Efflux ABC transporter, permease protein (437 aa)
 
          0.964
BACCAP_00920
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (530 aa)
              0.578
BACCAP_00918
Response regulator receiver domain protein (224 aa)
              0.578
BACCAP_01187
Uncharacterized protein (398 aa)
   
          0.476
BACCAP_03346
Uncharacterized protein (267 aa)
   
          0.460
BACCAP_00919
Uncharacterized protein (64 aa)
              0.459
BACCAP_01519
Uncharacterized protein (219 aa)
   
          0.447
BACCAP_04543
Uncharacterized protein (185 aa)
   
          0.445
BACCAP_03407
ABC transporter, ATP-binding protein (218 aa)
   
          0.424
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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