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BACCAP_00923 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00923" - Efflux ABC transporter, permease protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00923Efflux ABC transporter, permease protein (437 aa)    
Predicted Functional Partners:
BACCAP_00921
ABC transporter, ATP-binding protein (254 aa)
  0.993
BACCAP_01677
Efflux transporter, RND family, MFP subunit (564 aa)
 
  0.975
BACCAP_01676
ABC transporter, ATP-binding protein (250 aa)
  0.974
BACCAP_02533
ABC transporter, ATP-binding protein (231 aa)
  0.973
BACCAP_03536
ABC transporter, ATP-binding protein (247 aa)
  0.972
BACCAP_00922
Uncharacterized protein (822 aa)
 
          0.964
BACCAP_03537
Gram-positive signal peptide protein, YSIRK family (550 aa)
 
  0.943
BACCAP_02534
Uncharacterized protein (595 aa)
   
  0.936
BACCAP_03382
ABC transporter, ATP-binding protein (227 aa)
  0.911
BACCAP_03419
ABC transporter, ATP-binding protein (255 aa)
 
  0.891
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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