STRINGSTRING
BACCAP_00938 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00938" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00938Uncharacterized protein (3879 aa)    
Predicted Functional Partners:
BACCAP_00671
Uncharacterized protein (206 aa)
   
          0.778
BACCAP_03534
Uncharacterized protein (681 aa)
   
          0.777
BACCAP_03981
Uncharacterized protein (209 aa)
   
          0.775
sap
S-layer protein Sap (782 aa)
   
          0.775
BACCAP_00279
Uncharacterized protein (165 aa)
   
          0.775
BACCAP_01527
Uncharacterized protein (360 aa)
   
          0.773
BACCAP_00311
Uncharacterized protein (852 aa)
   
          0.773
BACCAP_04695
Uncharacterized protein (668 aa)
   
          0.769
BACCAP_04667
Uncharacterized protein (324 aa)
   
          0.765
BACCAP_01622
Copper amine oxidase domain protein (546 aa)
   
          0.757
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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