STRINGSTRING
BACCAP_00967 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00967" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00967Uncharacterized protein (273 aa)    
Predicted Functional Partners:
BACCAP_00966
Uncharacterized protein (218 aa)
              0.859
BACCAP_00965
Radical SAM domain protein (442 aa)
              0.859
BACCAP_00964
Uncharacterized protein (312 aa)
              0.859
BACCAP_00963
Radical SAM domain protein (386 aa)
              0.712
BACCAP_00968
Radical SAM domain protein (598 aa)
              0.700
BACCAP_00962
Uncharacterized protein (60 aa)
              0.652
BACCAP_00969
Radical SAM domain protein (337 aa)
              0.608
BACCAP_00970
YcaO-like family (581 aa)
              0.556
BACCAP_00971
Uncharacterized protein (262 aa)
              0.528
BACCAP_00972
Histidinol phosphate phosphatase HisJ family (253 aa)
              0.466
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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