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EDN01041.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN01041.1" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN01041.1Uncharacterized protein; KEGG- hpj-jhp0726 0.00027 hsdS_4; putative type I restriction enzyme (specificity subunit) K01154; COG- NOG19567 non supervised orthologous group; Psort location- Cytoplasmic, score-8.96 (197 aa)    
Predicted Functional Partners:
hsdM
KEGG- bli-BL02384 7.4e-152 hypothetical type I restriction-modification system M subunit K03427; COG- COG0286 Type I restriction-modification system methyltransferase subunit (524 aa)
 
 
  0.960
EDN01043.1
KEGG- cff-CFF8240_0988 2.9e-38 type I restriction-modification system, S subunit K01152; COG- COG0732 Restriction endonuclease S subunits (428 aa)
 
          0.926
EDN01045.1
Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification (1052 aa)
 
   
  0.859
EDN01044.1
Uncharacterized protein; Psort location- Cytoplasmic, score-8.96 (285 aa)
              0.845
EDN01046.1
Uncharacterized protein; KEGG- fnu-FN0946 1.3e-21 zinc metalloprotease; COG- COG1451 Predicted metal-dependent hydrolase; Psort location- Cytoplasmic, score-8.96 (241 aa)
 
          0.794
EDM99068.1
KEGG- par-Psyc_0877 2.2e-159 hsdM-1; putative type I restriction-modification system, M subunit K03427; COG- COG0286 Type I restriction-modification system methyltransferase subunit (524 aa)
 
 
  0.715
EDM98312.1
N-6 DNA Methylase; KEGG- tcx-Tcr_0332 5.3e-126 N-6 DNA methylase K03427; COG- COG0286 Type I restriction-modification system methyltransferase subunit (622 aa)
 
 
  0.714
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (889 aa)
     
 
  0.630
EDN01047.1
Uncharacterized protein; Psort location- Cytoplasmic, score-8.96 (81 aa)
              0.581
EDM99021.1
KEGG- psp-PSPPH_2917 0.00038 DNA-binding protein K00517; COG- NOG36107 non supervised orthologous group; Psort location- Cytoplasmic, score-8.96 (115 aa)
   
          0.492
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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