STRINGSTRING
BACCAP_00986 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_00986" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_00986Uncharacterized protein (241 aa)    
Predicted Functional Partners:
BACCAP_00985
Type I site-specific deoxyribonuclease, HsdR family (1052 aa)
 
     
  0.977
hsdM
Type I restriction-modification system, M subunit (524 aa)
 
     
  0.947
BACCAP_00983
Type I restriction modification DNA specificity domain protein (428 aa)
 
          0.940
BACCAP_00981
Uncharacterized protein (197 aa)
              0.747
BACCAP_00984
Uncharacterized protein (285 aa)
              0.734
BACCAP_00987
Uncharacterized protein (81 aa)
              0.686
BACCAP_03976
Type I site-specific deoxyribonuclease, HsdR family (1045 aa)
 
     
  0.543
BACCAP_02994
Putative type I restriction-modification system, M subunit (524 aa)
 
     
  0.522
BACCAP_03973
N-6 DNA Methylase (622 aa)
 
     
  0.486
BACCAP_03001
Type I site-specific deoxyribonuclease, HsdR family (1048 aa)
         
  0.422
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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