STRINGSTRING
nrdR protein (Pseudoflavonifractor capillosus) - STRING interaction network
"nrdR" - Transcriptional repressor NrdR in Pseudoflavonifractor capillosus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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nrdRTranscriptional repressor NrdR ; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes (108 aa)    
Predicted Functional Partners:
birA
Biotin-[acetyl-CoA carboxylase] synthetase ; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor (341 aa)
   
     
  0.656
BACCAP_01019
Uncharacterized protein (35 aa)
              0.623
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (710 aa)
           
  0.609
polA
DNA polymerase (889 aa)
 
     
  0.554
lspA
Signal peptidase II ; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (166 aa)
 
          0.547
nrdD
Anaerobic ribonucleoside-triphosphate reductase (773 aa)
         
  0.528
hisD
Histidinol dehydrogenase ; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (432 aa)
   
   
  0.495
lexA
LexA repressor ; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair (205 aa)
   
   
  0.494
nadE
NAD+ synthase (641 aa)
         
  0.490
BACCAP_02783
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (784 aa)
         
  0.481
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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