STRINGSTRING
BACCAP_01028 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01028" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01028Uncharacterized protein (302 aa)    
Predicted Functional Partners:
BACCAP_01030
Uncharacterized protein (423 aa)
              0.824
BACCAP_01029
Uncharacterized protein (448 aa)
              0.824
BACCAP_01031
Uncharacterized protein (154 aa)
              0.792
BACCAP_01026
Uncharacterized protein (393 aa)
              0.779
BACCAP_01027
Von Willebrand factor type A domain protein (786 aa)
              0.606
BACCAP_02214
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 (642 aa)
       
      0.474
BACCAP_01025
Uncharacterized protein (1103 aa)
              0.462
BACCAP_00187
Uncharacterized protein (371 aa)
   
          0.455
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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