STRINGSTRING
BACCAP_01046 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01046" - Methyltransferase domain protein in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01046Methyltransferase domain protein (215 aa)    
Predicted Functional Partners:
BACCAP_01048
DNA-binding helix-turn-helix protein (82 aa)
              0.859
BACCAP_01047
Putative chloramphenicol O-acetyltransferase (206 aa)
              0.859
rsmI
rRNA (cytidine-2’-O-)-methyltransferase RsmI ; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (277 aa)
   
   
  0.856
BACCAP_02106
UPF0348 protein BACCAP_02106 (403 aa)
 
     
  0.710
BACCAP_01193
Methyltransferase domain protein (249 aa)
   
  0.695
BACCAP_04861
Methyltransferase domain protein (244 aa)
   
  0.685
BACCAP_04180
Methyltransferase domain protein (231 aa)
   
  0.685
BACCAP_02153
Methyltransferase domain protein (189 aa)
   
  0.685
BACCAP_01860
Methyltransferase domain protein (255 aa)
   
  0.685
BACCAP_01289
Methyltransferase domain protein (273 aa)
   
  0.685
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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