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EDN01105.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN01105.1" - Methyltransferase domain protein in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
Coexpression
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[Homology]
Score
EDN01105.1Methyltransferase domain protein; KEGG- mcp-MCAP_0012 3.6e-24 N-6 adenine-specific DNA methylases, putative K00571; COG- COG4123 Predicted O-methyltransferase; Psort location- Cytoplasmic, score-8.96 (215 aa)    
Predicted Functional Partners:
EDN01106.1
Putative chloramphenicol O-acetyltransferase; KEGG- ctc-CTC01425 2.4e-43 chloramphenicol acetyltransferase K00638; COG- COG4845 Chloramphenicol O-acetyltransferase (206 aa)
              0.850
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (277 aa)
         
  0.846
EDN01107.1
DNA-binding helix-turn-helix protein; KEGG- pfl-PFL_0831 0.0032 carB; carbamoyl-phosphate synthase, large subunit K01955; COG- COG1396 Predicted transcriptional regulators; Psort location- Cytoplasmic, score-8.96 (82 aa)
              0.845
ppdK
Pyruvate, phosphate dikinase; KEGG- tte-TTE0981 0. ppsA2; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase K01006; COG- COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Psort location- Cytoplasmic, score-9.97; Belongs to the PEP-utilizing enzyme family (881 aa)
       
    0.840
ahcY
Adenosylhomocysteinase; KEGG- mta-Moth_0706 2.5e-126 adenosylhomocysteinase K01251; COG- COG0499 S-adenosylhomocysteine hydrolase; Psort location- Cytoplasmic, score-8.96 (414 aa)
       
    0.672
cdsA
Phosphatidate cytidylyltransferase; KEGG- tte-TTE1403 8.2e-34 cdsA; CDP-diglyceride synthetase K00981; COG- COG0575 CDP-diglyceride synthetase; Psort location- CytoplasmicMembrane, score-10.00 (271 aa)
       
    0.653
sun
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (447 aa)
   
 
  0.647
EDN01108.1
annotation not available (84 aa)
              0.614
EDN01595.1
23S rRNA (Uracil-5-)-methyltransferase RumA; KEGG- ctc-CTC02481 1.6e-99 tRNA (uracil-5-) -methyltransferase K00557; COG- COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; Psort location- Cytoplasmic, score-8.96; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family (454 aa)
 
 
  0.593
EDM98153.1
Nitroreductase family protein; KEGG- mma-MM1584 4.6e-40 NADPH-flavin oxidoreductase; COG- COG0778 Nitroreductase (167 aa)
       
    0.584
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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