STRINGSTRING
BACCAP_01053 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01053" - Dioxygenase in Pseudoflavonifractor capillosus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01053Dioxygenase (2307 aa)    
Predicted Functional Partners:
gnpA
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (723 aa)
 
     
  0.821
BACCAP_01058
Carbohydrate ABC transporter, carbohydrate-binding protein (456 aa)
 
          0.797
BACCAP_01057
ABC transporter, permease protein (312 aa)
 
          0.741
BACCAP_01056
ABC transporter, permease protein (293 aa)
 
          0.735
BACCAP_00197
Glycosyl hydrolase family 20, catalytic domain protein (1635 aa)
 
     
  0.620
BACCAP_01060
Transcriptional regulator, AraC family (283 aa)
 
          0.601
BACCAP_01145
Polysaccharide lyase family 8, super-sandwich domain protein (1343 aa)
   
     
  0.556
BACCAP_02587
Uncharacterized protein (197 aa)
   
          0.531
BACCAP_01055
Uncharacterized protein (71 aa)
              0.486
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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