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BACCAP_01057 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01057" - ABC transporter, permease protein in Pseudoflavonifractor capillosus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01057ABC transporter, permease protein (312 aa)    
Predicted Functional Partners:
BACCAP_01056
ABC transporter, permease protein (293 aa)
 
  0.994
BACCAP_00062
ABC transporter, ATP-binding protein (373 aa)
  0.984
BACCAP_01058
Carbohydrate ABC transporter, carbohydrate-binding protein (456 aa)
 
   
  0.978
BACCAP_00030
ABC transporter, ATP-binding protein (371 aa)
  0.977
BACCAP_01518
ABC transporter, permease protein (278 aa)
 
  0.973
BACCAP_01462
ABC transporter, permease protein (275 aa)
 
  0.965
BACCAP_01442
ABC transporter, permease protein (276 aa)
 
  0.962
gnpA
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (723 aa)
 
          0.962
BACCAP_00031
ABC transporter, permease protein (279 aa)
 
  0.956
treP
PTS system trehalose-specific IIBC component ; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane (643 aa)
     
 
  0.827
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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