STRINGSTRING
BACCAP_01070 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01070" - Probable RNA 2'-phosphotransferase in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01070Probable RNA 2’-phosphotransferase ; Removes the 2’-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1’’-2’’-cyclic phosphate (APPR>P). May function as an ADP- ribosylase (187 aa)    
Predicted Functional Partners:
BACCAP_01827
Uncharacterized protein (289 aa)
 
          0.696
BACCAP_01889
Uncharacterized protein (289 aa)
 
          0.682
BACCAP_01069
Uncharacterized protein (60 aa)
              0.664
BACCAP_01068
DNA-binding helix-turn-helix protein (348 aa)
              0.561
BACCAP_01071
Stage 0 sporulation protein A homolog ; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process (275 aa)
              0.541
BACCAP_04116
Uncharacterized protein (593 aa)
   
          0.536
BACCAP_02443
Acetyltransferase, GNAT family (136 aa)
   
 
    0.512
BACCAP_01996
Acetyltransferase, GNAT family (162 aa)
   
 
    0.512
rtcB
RNA-splicing ligase RtcB (448 aa)
 
        0.485
BACCAP_04117
ATPase family associated with various cellular activities (AAA) (352 aa)
   
          0.449
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (9%) [HD]