STRINGSTRING
treP protein (Pseudoflavonifractor capillosus) - STRING interaction network
"treP" - PTS system trehalose-specific IIBC component in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trePPTS system trehalose-specific IIBC component ; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane (643 aa)    
Predicted Functional Partners:
treC
Alpha,alpha-phosphotrehalase (549 aa)
 
  0.999
BACCAP_00073
PTS system, glucose-like IIB component ; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane (711 aa)
 
0.998
ptbA
PTS system, glucose subfamily, IIA component (178 aa)
 
0.998
BACCAP_01454
Phosphotransferase system, EIIC ; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane (485 aa)
 
0.997
BACCAP_00074
PRD domain protein (285 aa)
 
 
 
  0.996
BACCAP_01095
Phosphocarrier, HPr family (86 aa)
   
  0.996
BACCAP_00490
PRD domain protein (657 aa)
 
 
 
  0.995
BACCAP_03587
Phosphocarrier, HPr family (87 aa)
   
  0.984
BACCAP_03571
Phosphocarrier, HPr family (89 aa)
   
  0.984
BACCAP_02213
Phosphocarrier, HPr family (102 aa)
   
  0.984
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (3%) [HD]