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BACCAP_01105 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01105" - Iron chelate uptake ABC transporter, FeCT family, permease protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01105Iron chelate uptake ABC transporter, FeCT family, permease protein (360 aa)    
Predicted Functional Partners:
BACCAP_01104
ABC transporter, ATP-binding protein (261 aa)
  0.999
BACCAP_02772
ABC transporter, ATP-binding protein (275 aa)
  0.996
BACCAP_00707
ABC transporter, ATP-binding protein (251 aa)
  0.996
BACCAP_01280
ABC transporter, ATP-binding protein (263 aa)
 
  0.993
BACCAP_01106
Periplasmic binding protein (354 aa)
 
 
  0.992
BACCAP_01283
Periplasmic binding protein (382 aa)
 
 
  0.936
BACCAP_02771
Periplasmic binding protein (382 aa)
 
 
  0.908
BACCAP_00705
Periplasmic binding protein (373 aa)
 
 
  0.900
BACCAP_04806
ABC transporter, ATP-binding protein (250 aa)
   
  0.894
BACCAP_01103
CGGC domain protein (111 aa)
              0.860
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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