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cobA protein (Pseudoflavonifractor capillosus) - STRING interaction network
"cobA" - Uroporphyrinogen-III C-methyltransferase in Pseudoflavonifractor capillosus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobAUroporphyrinogen-III C-methyltransferase (496 aa)    
Predicted Functional Partners:
hemC
Pre-uroporphyrinogen synthase ; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (287 aa)
  0.999
hemB
Delta-aminolevulinic acid dehydratase (328 aa)
 
  0.999
BACCAP_01111
Siroheme synthase domain protein (150 aa)
 
  0.999
hemA
Glutamyl-tRNA reductase ; Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) (398 aa)
 
 
  0.997
hemL
Glutamate-1-semialdehyde aminotransferase (427 aa)
 
 
  0.993
cobI
Precorrin-2 C(20)-methyltransferase (230 aa)
 
 
  0.979
cbiK
Cobalt chelatase (CbiK) (263 aa)
 
   
  0.960
BACCAP_04782
Methyltransferase, MtaA/CmuA family (451 aa)
   
 
  0.950
BACCAP_04003
Methyltransferase, MtaA/CmuA family (452 aa)
   
 
  0.950
cobK
Precorrin-6A reductase (251 aa)
       
  0.949
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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