STRINGSTRING
cbiQ protein (Pseudoflavonifractor capillosus) - STRING interaction network
"cbiQ" - Cobalt ABC transporter, permease protein CbiQ in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiQCobalt ABC transporter, permease protein CbiQ (259 aa)    
Predicted Functional Partners:
BACCAP_01114
Cobalt ABC transporter, ATP-binding protein (284 aa)
 
  0.998
cbiN
Energy-coupling factor transporter probable substrate-capture protein CbiN ; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import (108 aa)
 
 
  0.997
cbiM
Energy-coupling factor transporter probable substrate-capture protein CbiM ; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import (235 aa)
   
  0.996
BACCAP_02318
Energy-coupling factor transporter ATP-binding protein EcfA ; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (289 aa)
 
  0.952
cobI
Precorrin-2 C(20)-methyltransferase (230 aa)
 
   
  0.937
BACCAP_02317
Energy-coupling factor transporter ATP-binding protein EcfA ; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (282 aa)
 
  0.935
BACCAP_04103
ABC transporter, ATP-binding protein (569 aa)
   
  0.922
BACCAP_02576
ABC transporter, ATP-binding protein (460 aa)
   
  0.922
BACCAP_02549
ABC transporter, ATP-binding protein (458 aa)
   
  0.922
BACCAP_02185
ABC transporter, ATP-binding protein (490 aa)
   
  0.922
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (7%) [HD]