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STRINGSTRING
EDN00936.1 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"EDN00936.1" - COG: COG2364 Predicted membrane protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDN00936.1COG- COG2364 Predicted membrane protein; Psort location- CytoplasmicMembrane, score-10.00 (219 aa)    
Predicted Functional Partners:
EDM97426.1
Uncharacterized protein; KEGG- sat-SYN_02496 2.7e-19 cytidylate kinase K00945; COG- NOG14451 non supervised orthologous group (197 aa)
 
          0.857
EDN00935.1
Uncharacterized protein; COG- COG1846 Transcriptional regulators; Psort location- Cytoplasmic, score-8.96 (84 aa)
              0.846
EDN00937.1
KEGG- cpe-CPE1401 2.5e-32 probable DNA polymerase III epsilon chain K02342; COG- COG0847 DNA polymerase III, epsilon subunit and related 3-5 exonucleases; Psort location- Cytoplasmic, score-8.96 (191 aa)
              0.591
EDN01245.1
Uncharacterized protein; COG- COG0655 Multimeric flavodoxin WrbA (449 aa)
   
          0.403
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacteroides capillosus ATCC 29799, P. capillosus ATCC 29799, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus ATCC29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799
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