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BACCAP_01159 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01159" - Exonuclease, DNA polymerase III, epsilon subunit family in Pseudoflavonifractor capillosus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01159Exonuclease, DNA polymerase III, epsilon subunit family (191 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (370 aa)
 
 
  0.980
BACCAP_03522
DNA-directed DNA polymerase (1161 aa)
   
  0.963
polA
DNA polymerase (889 aa)
   
  0.923
dnaX
DNA polymerase III, subunit gamma and tau (596 aa)
   
  0.916
BACCAP_03200
DNA polymerase III subunit gamma and tau family protein (381 aa)
   
  0.876
BACCAP_03003
Uncharacterized protein (684 aa)
 
 
    0.840
holA
DNA polymerase III, delta subunit (347 aa)
     
  0.818
pyk
Pyruvate kinase (478 aa)
   
 
  0.779
polC
DNA polymerase III PolC-type ; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity (1390 aa)
   
   
 
0.778
BACCAP_04565
HDIG domain protein (438 aa)
   
 
  0.768
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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