STRINGSTRING
BACCAP_01169 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01169" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01169Uncharacterized protein (481 aa)    
Predicted Functional Partners:
BACCAP_01170
Uncharacterized protein (287 aa)
   
  0.984
BACCAP_01171
ABC transporter, ATP-binding protein (351 aa)
 
   
  0.980
BACCAP_01168
Uncharacterized protein (470 aa)
 
          0.979
BACCAP_01700
Uncharacterized protein (234 aa)
   
  0.924
BACCAP_01701
ABC transporter, ATP-binding protein (341 aa)
 
   
  0.859
BACCAP_02852
Uncharacterized protein (146 aa)
 
   
  0.571
BACCAP_01698
Uncharacterized protein (363 aa)
 
          0.570
BACCAP_01172
Uncharacterized protein (585 aa)
              0.512
BACCAP_03866
ABC transporter, ATP-binding protein (307 aa)
   
   
  0.442
BACCAP_03649
ABC transporter, ATP-binding protein (274 aa)
   
   
  0.442
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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