STRINGSTRING
BACCAP_01196 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01196" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01196Uncharacterized protein (156 aa)    
Predicted Functional Partners:
BACCAP_02481
DNA-binding helix-turn-helix protein (282 aa)
   
          0.630
BACCAP_03553
ANTAR domain protein (180 aa)
   
          0.549
BACCAP_01197
Uncharacterized protein (297 aa)
              0.477
BACCAP_03286
DNA-binding helix-turn-helix protein (268 aa)
   
          0.461
BACCAP_03783
Uncharacterized protein (223 aa)
   
          0.456
BACCAP_04740
Uncharacterized protein (101 aa)
   
          0.452
BACCAP_03293
Toxin-antitoxin system, antitoxin component, Xre family (174 aa)
   
          0.424
BACCAP_03420
Efflux ABC transporter, permease protein (738 aa)
   
          0.423
BACCAP_03434
Uncharacterized protein (139 aa)
   
          0.417
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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