STRINGSTRING
BACCAP_01212 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01212" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01212Uncharacterized protein (224 aa)    
Predicted Functional Partners:
BACCAP_00379
ParB-like protein (297 aa)
 
 
  0.951
BACCAP_01213
Uncharacterized protein (71 aa)
 
          0.917
BACCAP_00375
ParB-like protein (269 aa)
 
 
  0.880
dnaA
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (426 aa)
   
 
  0.744
BACCAP_04215
ParB-like protein (528 aa)
 
 
  0.740
BACCAP_04495
ParB-like protein (486 aa)
 
 
  0.728
BACCAP_03784
Uncharacterized protein (182 aa)
 
 
  0.727
minD
Site-determining protein (251 aa)
 
 
 
  0.725
cobH
Precorrin-8X methylmutase (216 aa)
         
  0.664
BACCAP_04117
ATPase family associated with various cellular activities (AAA) (352 aa)
   
 
    0.652
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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