STRINGSTRING
BACCAP_01213 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01213" - Uncharacterized protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01213Uncharacterized protein (71 aa)    
Predicted Functional Partners:
BACCAP_01212
Uncharacterized protein (224 aa)
 
          0.917
BACCAP_02720
Uncharacterized protein (93 aa)
 
          0.862
BACCAP_02719
Putative DNA primase (980 aa)
 
          0.862
BACCAP_01216
Helicase C-terminal domain protein (2317 aa)
 
          0.858
BACCAP_02723
Uncharacterized protein (257 aa)
 
          0.857
BACCAP_02714
Helicase C-terminal domain protein (2062 aa)
 
          0.837
BACCAP_02724
Uncharacterized protein (85 aa)
 
          0.814
BACCAP_03690
Uncharacterized protein (354 aa)
 
          0.810
BACCAP_02713
Uncharacterized protein (360 aa)
 
          0.810
BACCAP_02710
Uncharacterized protein (99 aa)
 
          0.788
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
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