STRINGSTRING
BACCAP_01216 protein (Pseudoflavonifractor capillosus) - STRING interaction network
"BACCAP_01216" - Helicase C-terminal domain protein in Pseudoflavonifractor capillosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACCAP_01216Helicase C-terminal domain protein (2317 aa)    
Predicted Functional Partners:
BACCAP_03688
Uncharacterized protein (144 aa)
 
          0.893
BACCAP_01213
Uncharacterized protein (71 aa)
 
          0.858
BACCAP_03690
Uncharacterized protein (354 aa)
          0.838
BACCAP_02713
Uncharacterized protein (360 aa)
          0.838
BACCAP_02720
Uncharacterized protein (93 aa)
 
          0.763
BACCAP_01214
Uncharacterized protein (118 aa)
              0.763
BACCAP_02718
Uncharacterized protein (71 aa)
   
          0.744
BACCAP_03785
Uncharacterized protein (91 aa)
   
          0.727
BACCAP_02721
DNA topoisomerase (697 aa)
 
     
  0.726
BACCAP_02729
Uncharacterized protein (91 aa)
   
          0.724
Your Current Organism:
Pseudoflavonifractor capillosus
NCBI taxonomy Id: 411467
Other names: Bacillus capillosus, Bacteroides capillosus, Bacteroides capillosus ATCC 29799, P. capillosus, P. capillosus ATCC 29799, Pseudobacterium capillosum, Pseudoflavonifractor, Pseudoflavonifractor Carlier et al. 2010, Pseudoflavonifractor capillosus, Pseudoflavonifractor capillosus ATCC 29799, Pseudoflavonifractor capillosus str. ATCC 29799, Pseudoflavonifractor capillosus strain ATCC 29799, Ristella capillosa
Server load: low (11%) [HD]